- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x TNX: 1,5-anhydro-2-deoxy-2-(ethanethioylamino)-D-arabino-hex-1-enitol(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: R.156, Y.157, A.429, A.437
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Y.157
- Water bridges: A:R.156, A:A.437
- Salt bridges: A:R.156
SO4.3: 4 residues within 4Å:- Chain A: R.58, T.79, A.80, H.81
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:A.80, A:H.81
- Salt bridges: A:R.58, A:H.81
SO4.14: 4 residues within 4Å:- Chain B: R.156, Y.157, A.429, A.437
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.157
- Water bridges: B:R.156, B:A.437
- Salt bridges: B:R.156
SO4.15: 4 residues within 4Å:- Chain B: R.58, T.79, A.80, H.81
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:A.80, B:H.81
- Salt bridges: B:R.58, B:H.81
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 10 residues within 4Å:- Chain A: H.351, Q.352, W.367, G.368, L.369, E.376, W.414
- Chain B: F.284, H.322, S.323
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:H.351, A:Q.352, B:S.323
- Water bridges: A:E.320, A:T.372
GOL.16: 10 residues within 4Å:- Chain A: F.284, H.322, S.323
- Chain B: H.351, Q.352, W.367, G.368, L.369, E.376, W.414
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:H.351, B:Q.352, A:S.323
- Water bridges: B:T.372
- 16 x CL: CHLORIDE ION(Non-functional Binders)
CL.5: 7 residues within 4Å:- Chain A: Y.277, G.279, T.280, K.281
- Chain B: L.412, S.413, W.414
Ligand excluded by PLIPCL.6: 4 residues within 4Å:- Chain A: D.181, R.182, R.185, I.501
Ligand excluded by PLIPCL.7: 5 residues within 4Å:- Chain A: K.281, V.282
- Chain B: K.281, V.282
- Ligands: CL.19
Ligand excluded by PLIPCL.8: 3 residues within 4Å:- Chain A: R.50, H.81, G.82
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain A: K.115, A.116, A.117, H.244
Ligand excluded by PLIPCL.10: 4 residues within 4Å:- Chain A: A.158, N.189, K.190, R.312
Ligand excluded by PLIPCL.11: 1 residues within 4Å:- Chain A: R.75
Ligand excluded by PLIPCL.12: 1 residues within 4Å:- Chain A: P.141
Ligand excluded by PLIPCL.17: 7 residues within 4Å:- Chain A: L.412, S.413, W.414
- Chain B: Y.277, G.279, T.280, K.281
Ligand excluded by PLIPCL.18: 4 residues within 4Å:- Chain B: D.181, R.182, R.185, I.501
Ligand excluded by PLIPCL.19: 5 residues within 4Å:- Chain A: K.281, V.282
- Chain B: K.281, V.282
- Ligands: CL.7
Ligand excluded by PLIPCL.20: 3 residues within 4Å:- Chain B: R.50, H.81, G.82
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain B: K.115, A.116, A.117, H.244
Ligand excluded by PLIPCL.22: 4 residues within 4Å:- Chain B: A.158, N.189, K.190, R.312
Ligand excluded by PLIPCL.23: 1 residues within 4Å:- Chain B: R.75
Ligand excluded by PLIPCL.24: 1 residues within 4Å:- Chain B: P.141
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Santana, A.G. et al., N-Acetyl glycals are tight-binding and environmentally insensitive inhibitors of hexosaminidases. Chem.Commun.(Camb.) (2016)
- Release Date
- 2016-10-26
- Peptides
- B-N-acetylhexosaminidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x TNX: 1,5-anhydro-2-deoxy-2-(ethanethioylamino)-D-arabino-hex-1-enitol(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 16 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Santana, A.G. et al., N-Acetyl glycals are tight-binding and environmentally insensitive inhibitors of hexosaminidases. Chem.Commun.(Camb.) (2016)
- Release Date
- 2016-10-26
- Peptides
- B-N-acetylhexosaminidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A