SMTL ID : 5fdl.1

Crystal Structure of K103N/Y181C Mutant HIV-1 Reverse Transcriptase (RT) in Complex with IDX899

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 5DV: methyl (R)-(2-carbamoyl-5-chloro-1H-indol-3-yl)[3-(2-cyanoethyl)-5-methylphenyl]phosphinate(Non-covalent)

5DV.1: 18 residues within 4Å: Chain A: P.95, L.100, K.101, N.103, V.106, V.108, C.181, Y.188, V.189, G.190, F.227, L.228, W.229, L.234, H.235, P.236, Y.318 Chain B: E.138 17 PLIP interactions: 16 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:P.95, A:V.106, A:V.106, A:Y.188, A:Y.188, A:Y.188, A:W.229, A:W.229, A:L.234, A:Y.318 Hydrogen bonds: A:K.101, A:K.101, A:N.103, B:E.138 pi-Stacking: A:W.229, A:W.229 Halogen bonds: A:L.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dousson, C. et al., Discovery of the Aryl-phospho-indole IDX899, a Highly Potent Anti-HIV Non-nucleoside Reverse Transcriptase Inhibitor. J.Med.Chem. (2016)

Release Date

2016-02-17

Peptides

P51 Reverse transcriptase: A
P66 Reverse transcriptase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

P51 Reverse transcriptase

P66 Reverse transcriptase