SMTL ID : 5fgz.1

E. coli PBP1b in complex with FPI-1465

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

1 x M0E: MOENOMYCIN(Non-covalent)

M0E.1: 14 residues within 4Å: Chain A: E.176, Q.214, K.217, N.218, E.224, Y.258, Q.261, E.266, V.297, K.298, G.299, A.300, S.301, I.302 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.258, A:I.302 Hydrogen bonds: A:Q.214, A:K.217, A:N.218, A:E.224, A:E.266, A:V.297, A:V.297, A:A.300, A:S.301, A:S.301, A:I.302 Salt bridges: A:K.217, A:K.217

1 x 5VW: [[(3~{R},6~{S})-1-methanoyl-6-[[(3~{S})-pyrrolidin-3-yl]oxycarbamoyl]piperidin-3-yl]amino] hydrogen sulfate(Covalent)

5VW.2: 17 residues within 4Å: Chain A: S.450, G.452, S.453, K.456, D.496, S.515, N.517, L.554, G.555, A.556, T.625, T.642, G.643, T.644, T.645, N.646, A.679 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:D.496, A:N.646 Hydrogen bonds: A:S.453, A:K.456, A:S.515, A:T.625, A:T.625, A:T.642, A:T.642, A:T.642, A:T.644, A:T.644, A:T.644, A:N.646, A:A.679 Salt bridges: A:K.641

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

King, A.M. et al., Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-beta-Lactamases and Penicillin-Binding Proteins. Acs Chem.Biol. (2016)

Release Date

2016-01-20

Peptides

Penicillin-binding protein 1B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Penicillin-binding protein 1B

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