SMTL ID : 5fhf.1

Crystal structure of Bacteroides sp Pif1 in complex with ADP-AlF4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 14 residues within 4Å: Chain A: M.4, I.5, M.10, K.29, A.30, G.31, S.32, G.33, K.34, T.35, T.36, F.187, R.188 Ligands: ALF.2 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:I.5, A:I.5, A:G.31, A:S.32, A:G.33, A:K.34, A:T.35, A:T.35, A:T.36, A:T.36, A:R.188, A:R.188 Water bridges: A:R.188 Salt bridges: A:K.34 pi-Stacking: A:F.187, A:F.187

1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.2: 3 residues within 4Å: Chain A: K.34, T.35 Ligands: ADP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.35, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, X. et al., Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1. Cell Rep (2016)

Release Date

2016-03-30

Peptides

Uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein

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