SMTL ID : 5fjn.2 (1 other biounit)

Structure of L-Amino acid deaminase from Proteus myxofaciens in complex with anthranilate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 40 residues within 4Å: Chain A: I.43, G.44, G.45, G.46, I.47, Q.48, L.66, E.67, K.68, E.70, E.74, Q.75, S.76, R.78, A.79, Y.80, S.81, Q.82, C.208, A.209, V.210, A.238, G.239, G.240, W.242, F.246, L.261, Q.263, F.352, R.356, A.392, V.393, V.394, T.419, V.420, W.421, G.422, M.423, T.424 Ligands: BE2.2 32 PLIP interactions: 32 interactions with chain A Hydrophobic interactions: A:Y.80, A:L.261, A:Q.263, A:V.394 Hydrogen bonds: A:G.45, A:Q.48, A:K.68, A:E.74, A:Q.75, A:Q.75, A:Q.75, A:S.76, A:S.76, A:Y.80, A:S.81, A:Q.82, A:Q.82, A:V.210, A:V.210, A:T.419, A:G.422, A:M.423, A:T.424 Water bridges: A:G.46, A:G.46, A:G.69, A:G.69, A:E.74, A:E.74, A:I.241, A:T.417, A:T.417

1 x BE2: 2-AMINOBENZOIC ACID(Non-covalent)

BE2.2: 7 residues within 4Å: Chain A: Y.80, Q.82, L.261, R.298, V.420, W.421 Ligands: FAD.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.261, A:V.420 Hydrogen bonds: A:Q.82, A:V.420 Salt bridges: A:R.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Motta, P. et al., Structure-Function Relationships in L-Amino Acid Deaminase, a Flavoprotein Belonging to a Novel Class of Biotechnologically Relevant Enzymes. J.Biol.Chem. (2016)

Release Date

2016-04-06

Peptides

L-AMINO ACID DEAMINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

L-AMINO ACID DEAMINASE

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