SMTL ID : 5fly.1 (1 other biounit)

The FhuD protein from S.pseudintermedius

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

5 x CD: CADMIUM ION(Non-covalent)

CD.1: 5 residues within 4Å: Chain A: E.210, K.213, Y.214 Ligands: CL.9, CL.10 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.210, A:E.210, H2O.17 CD.2: 4 residues within 4Å: Chain A: E.4, K.23 Ligands: CL.8, CL.13 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.4, H2O.1 CD.3: 2 residues within 4Å: Chain A: D.95, K.99 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.95, A:D.95, H2O.8, H2O.8 CD.4: 4 residues within 4Å: Chain A: K.208, E.209 Ligands: CL.6, CL.7 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.209, A:E.209 CD.5: 3 residues within 4Å: Chain A: D.20 Ligands: CL.11, CL.12 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.20, A:D.20, H2O.2

8 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 4 residues within 4Å: Chain A: K.208, E.209 Ligands: CD.4, CL.7 Ligand excluded by PLIP CL.7: 5 residues within 4Å: Chain A: P.207, K.208, E.209 Ligands: CD.4, CL.6 Ligand excluded by PLIP CL.8: 4 residues within 4Å: Chain A: K.3, E.4 Ligands: CD.2, CL.13 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain A: P.207, E.210, Y.214 Ligands: CD.1 Ligand excluded by PLIP CL.10: 3 residues within 4Å: Chain A: E.210, K.213 Ligands: CD.1 Ligand excluded by PLIP CL.11: 2 residues within 4Å: Chain A: D.20 Ligands: CD.5 Ligand excluded by PLIP CL.12: 4 residues within 4Å: Chain A: A.7, K.18, D.20 Ligands: CD.5 Ligand excluded by PLIP CL.13: 5 residues within 4Å: Chain A: E.4, K.23, D.24 Ligands: CD.2, CL.8 Ligand excluded by PLIP

1 x 7PG: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL(Non-covalent)

7PG.14: 14 residues within 4Å: Chain A: T.34, Y.88, Y.108, E.162, F.164, Y.169, Y.171, W.175, G.176, R.177, W.203, W.258, Y.259, N.260 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.175, A:R.177, A:R.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abate, F. et al., Crystal Structure of Fhud at 1.6 Angstrom Resolution: A Ferrichrome-Binding Protein from the Animal and Human Pathogen Staphylococcus Pseudintermedius. Acta Crystallogr.,Sect.F (2016)

Release Date

2015-12-02

Peptides

Ferrichrome ABC transporter substrate-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ferrichrome ABC transporter substrate-binding protein

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