SMTL ID : 5fph.2 (6 other biounits)

The GTPase domains of the immunity-related Irga6 dimerize in a parallel head-to-head fashion

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.1: 17 residues within 4Å: Chain A: T.88, G.89, S.90, G.91, K.92, S.93, S.94, T.112, V.114, D.136, T.193, K.194, D.196, S.241, N.242, K.243 Ligands: MG.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.89, A:S.90, A:G.91, A:K.92, A:S.93, A:S.93, A:S.94, A:K.194, A:S.241, A:N.242 Salt bridges: A:D.196

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: K.92, S.93, D.136 Ligands: GNP.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:S.93, A:D.136, A:D.136 MG.3: 3 residues within 4Å: Chain A: D.160, E.186, E.187 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.160, A:E.186, A:E.187, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schulte, K. et al., The Immunity-Related Gtpase Irga6 Dimerizes in a Parallel Head-to-Head Fashion. Bmc Biol. (2016)

Release Date

2016-02-10

Peptides

INTERFERON-INDUCIBLE GTPASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

INTERFERON-INDUCIBLE GTPASE 1

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