SMTL ID : 5fs9.2 (1 other biounit)

Crystal structure of the G338E mutant of human apoptosis inducing factor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 35 residues within 4Å: Chain A: I.35, G.36, G.37, G.38, T.39, A.40, V.60, S.61, E.62, D.63, R.70, P.71, S.74, K.75, K.129, K.130, V.131, A.157, T.158, G.159, F.182, R.183, K.184, L.209, E.212, N.301, L.304, G.335, D.336, E.351, H.352, H.353, A.356, F.380, W.381 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:R.70, A:F.182, A:R.183, A:L.209 Hydrogen bonds: A:G.37, A:T.39, A:T.39, A:A.40, A:E.62, A:E.62, A:R.70, A:K.75, A:V.131, A:V.131, A:G.160, A:K.184, A:K.184, A:D.336, A:E.351, A:H.353, A:W.381, A:W.381 Water bridges: A:G.38, A:T.39, A:A.41, A:R.70, A:G.159, A:R.183, A:D.336, A:A.337, A:D.354 Salt bridges: A:R.70, A:R.183

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: M.379, R.427, S.428, M.483, P.484, R.487 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.427, A:S.428, A:R.487, A:R.487 Water bridges: A:D.354, A:D.354

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sevrioukova, I.F., Structure/Function Relations in Aifm1 Variants Associated with Neurodegenerative Disorders. J.Mol.Biol. (2016)

Release Date

2016-05-11

Peptides

APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

APOPTOSIS-INDUCING FACTOR 1, MITOCHONDRIAL

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