SMTL ID : 5fx6.1

Novel inhibitors of human rhinovirus 3C protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x 6OY: ethyl (4R)-4-[[(2S,4S)-1-[(2S)-3-methyl-2-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]butanoyl]-4-phenyl-pyrrolidin-2-yl]carbonylamino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate(Covalent)

6OY.1: 15 residues within 4Å: Chain A: H.42, L.128, L.129, S.130, T.144, K.145, S.146, G.147, C.149, H.163, V.164, G.165, G.166, N.167, F.172 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:H.42, A:F.172 Hydrogen bonds: A:S.130, A:T.144, A:T.144, A:G.147, A:V.164, A:G.166, A:G.166 Water bridges: A:G.131, A:C.149, A:N.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawatkar, S.P. et al., Design and Structure-Activity Relationships of Novel Inhibitors of Human Rhinovirus 3C Protease. Bioorg.Med.Chem.Lett. (2016)

Release Date

2016-06-22

Peptides

RHINOVIRUS 3C PROTEASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RHINOVIRUS 3C PROTEASE

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