SMTL ID : 5fxm.1

Structure of FAE solved by SAD from data collected by Direct Data Collection (DDC) using the ESRF RoboDiff goniometer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

homo-dimer

Ligands

10 x CD: CADMIUM ION(Non-covalent)

CD.1: 3 residues within 4Å: Chain A: C.35, H.98, M.101 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.35, A:H.98, H2O.2 CD.2: 5 residues within 4Å: Chain A: E.106, H.288, E.291, H.295, H.297 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.106, A:H.288, A:E.291, A:H.295, A:H.297 CD.3: 3 residues within 4Å: Chain A: E.219 Chain B: H.294, H.296 5 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.294, B:H.296, A:E.219, A:E.219, H2O.4 CD.4: 2 residues within 4Å: Chain A: H.159, H.292 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.159, A:H.292, H2O.2, H2O.2, H2O.2 CD.5: 1 residues within 4Å: Chain A: H.293 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.293 CD.6: 3 residues within 4Å: Chain B: C.35, H.98, M.101 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.35, B:H.98, H2O.3 CD.7: 5 residues within 4Å: Chain B: E.106, H.288, E.291, H.295, H.297 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.106, B:H.288, B:E.291, B:H.295, B:H.297 CD.8: 3 residues within 4Å: Chain A: H.294, H.296 Chain B: E.219 5 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:H.294, A:H.296, B:E.219, B:E.219, H2O.2 CD.9: 2 residues within 4Å: Chain B: H.159, H.292 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:H.159, B:H.292, H2O.4, H2O.4, H2O.4 CD.10: 1 residues within 4Å: Chain B: H.293 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nurizzo, D. et al., Robodiff: Combining a Sample Changer and Goniometer for Highly Automated Macromolecular Crystallography Experiments. Acta Crystallogr.,Sect.D (2016)

Release Date

2016-03-16

Peptides

ENDO-1,4-BETA-XYLANASE Y: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ENDO-1,4-BETA-XYLANASE Y

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