SMTL ID : 5g2h.1

S. enterica HisA with mutation L169R

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: G.203, G.225, R.226 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.203, A:G.225, A:R.226, A:R.226 Water bridges: A:A.227 SO4.2: 2 residues within 4Å: Chain A: M.1, R.220 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:M.1 Salt bridges: A:R.220 SO4.3: 5 residues within 4Å: Chain A: G.81, V.82, R.83, G.102, S.103 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.81, A:V.82, A:G.102, A:S.103, A:S.103 Water bridges: A:G.80, A:T.104 Salt bridges: A:R.83 SO4.8: 5 residues within 4Å: Chain A: K.138, E.189 Chain B: K.138, E.189 Ligands: SO4.16 10 PLIP interactions: 5 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:E.189, B:E.189, A:E.154, A:E.154 Water bridges: B:K.138, B:K.138, A:K.138, A:K.138 Salt bridges: B:K.138, A:K.138 SO4.9: 3 residues within 4Å: Chain B: G.203, G.225, R.226 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.203, B:G.225, B:R.226, B:R.226 Water bridges: B:A.227 SO4.10: 2 residues within 4Å: Chain B: M.1, R.220 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:M.1 Salt bridges: B:R.220 SO4.11: 5 residues within 4Å: Chain B: G.81, V.82, R.83, G.102, S.103 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:G.81, B:V.82, B:G.102, B:S.103, B:S.103 Water bridges: B:G.80, B:T.104 Salt bridges: B:R.83 SO4.16: 5 residues within 4Å: Chain A: K.138, E.189 Chain B: K.138, E.189 Ligands: SO4.8 10 PLIP interactions: 5 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:E.154, A:E.189, B:E.154, B:E.189 Water bridges: A:K.138, A:K.138, B:K.138, B:K.138 Salt bridges: A:K.138, B:K.138

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 2 residues within 4Å: Chain A: D.37, A.40 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.36 Water bridges: A:D.37, A:D.37 GOL.5: 5 residues within 4Å: Chain A: V.106, P.109, V.151, L.156, T.159 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.159, A:T.159 GOL.6: 3 residues within 4Å: Chain A: P.109, D.110, K.113 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.110, A:K.113 GOL.12: 2 residues within 4Å: Chain B: D.37, A.40 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Q.36, B:D.37 Water bridges: B:D.37, B:D.37 GOL.13: 5 residues within 4Å: Chain B: V.106, P.109, V.151, L.156, T.159 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.159 GOL.14: 3 residues within 4Å: Chain B: P.109, D.110, K.113 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.113

2 x NA: SODIUM ION(Non-functional Binders)

NA.7: 1 residues within 4Å: Chain A: E.147 No protein-ligand interaction detected (PLIP) NA.15: 1 residues within 4Å: Chain B: E.147 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newton, M.S. et al., Structural and functional innovations in the real-time evolution of new ( beta alpha )8 barrel enzymes. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-04-19

Peptides

1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase