SMTL ID : 5g30.1 (1 other biounit)

Crystallographic structure of mutant D60S of thioredoxin from Litopenaeus vannamei

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 2 residues within 4Å: Chain B: K.41, E.44 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:K.41 ACT.2: 5 residues within 4Å: Chain B: L.15, M.80, K.81, N.82, G.83 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.15 Hydrogen bonds: B:N.82, B:G.83

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 7 residues within 4Å: Chain B: D.7, S.60, E.61, C.62, E.63, D.64, I.65 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.60, B:E.63, B:E.63, B:D.64 Water bridges: B:Q.8 PEG.4: 6 residues within 4Å: Chain B: I.38, K.41, A.92, N.93, Y.94, D.95 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.94, B:D.95, B:D.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Campos-Acevedo, A.A. et al., Is dimerization a common feature in thioredoxins? The case of thioredoxin from Litopenaeus vannamei. Acta Crystallogr D Struct Biol (2017)

Release Date

2017-03-15

Peptides

THIOREDOXIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

THIOREDOXIN

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