- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 8 x IOD: IODIDE ION(Non-functional Binders)
IOD.3: 5 residues within 4Å:- Chain A: K.97, C.99
- Chain C: P.192, R.272
- Ligands: ACT.25
Ligand excluded by PLIPIOD.8: 2 residues within 4Å:- Chain B: Q.249, R.255
Ligand excluded by PLIPIOD.9: 5 residues within 4Å:- Chain B: T.117, C.119, Q.147, H.148, T.160
Ligand excluded by PLIPIOD.13: 1 residues within 4Å:- Chain B: H.263
Ligand excluded by PLIPIOD.16: 5 residues within 4Å:- Chain A: H.101, Q.103
- Chain C: R.272, D.655, M.656
Ligand excluded by PLIPIOD.17: 4 residues within 4Å:- Chain C: A.45, P.46, N.47, P.265
Ligand excluded by PLIPIOD.18: 2 residues within 4Å:- Chain C: K.411, R.606
Ligand excluded by PLIPIOD.19: 3 residues within 4Å:- Chain C: A.7, N.10, P.684
Ligand excluded by PLIP- 3 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 6 residues within 4Å:- Chain A: V.184, T.185, V.186, E.193, T.195, E.198
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:E.193
- Hydrogen bonds: A:V.186, A:E.198
ACT.24: 5 residues within 4Å:- Chain C: D.93, K.94, W.215, T.218, D.219
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:K.94, C:W.215
- Water bridges: C:T.218
- Salt bridges: C:K.94
ACT.25: 6 residues within 4Å:- Chain A: K.97, D.100
- Chain C: F.120, M.269, P.271
- Ligands: IOD.3
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain C- Hydrophobic interactions: A:K.97, C:F.120, C:M.269
- Hydrogen bonds: A:D.100
- Salt bridges: A:K.97
- 10 x CL: CHLORIDE ION(Non-functional Binders)
CL.5: 1 residues within 4Å:- Chain A: H.144
Ligand excluded by PLIPCL.10: 4 residues within 4Å:- Chain B: P.120, Q.147
- Chain C: N.653, G.658
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain B: N.130, G.135, K.199
Ligand excluded by PLIPCL.12: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPCL.20: 2 residues within 4Å:- Chain C: E.403, R.406
Ligand excluded by PLIPCL.21: 3 residues within 4Å:- Chain C: R.527, Q.542, F.543
Ligand excluded by PLIPCL.22: 1 residues within 4Å:- Chain C: P.619
Ligand excluded by PLIPCL.23: 2 residues within 4Å:- Chain C: P.21, H.22
Ligand excluded by PLIPCL.29: 0 residues within 4Å:- (No contacts)
Ligand excluded by PLIPCL.30: 1 residues within 4Å:- Chain C: K.620
Ligand excluded by PLIP- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.7: 32 residues within 4Å:- Chain A: H.101, G.102, Q.103
- Chain B: K.26, F.27, I.28, A.29, G.30, G.31, T.32, N.33, L.34, G.98, A.99, L.103, A.107, T.108, A.110, G.111, N.112, L.114, Q.115, P.162, S.163, D.164, E.211, L.212, I.213, K.230, Y.237, A.238, F.239
27 PLIP interactions:27 interactions with chain B- Hydrophobic interactions: B:L.103, B:Y.237, B:F.239
- Hydrogen bonds: B:K.26, B:F.27, B:A.29, B:G.30, B:G.31, B:T.32, B:T.32, B:N.33, B:L.34, B:N.75, B:A.99, B:T.108, B:N.112, B:Q.115, B:D.164, B:D.164, B:I.213, B:I.213, B:K.230
- Water bridges: B:L.114, B:M.165, B:A.240
- pi-Stacking: B:F.239
- pi-Cation interactions: B:R.118
- 1 x MCN: PTERIN CYTOSINE DINUCLEOTIDE(Non-covalent)
MCN.14: 36 residues within 4Å:- Chain A: Q.157, C.210
- Chain C: G.240, G.241, F.242, G.243, R.350, M.465, I.468, G.469, T.470, G.471, S.472, I.475, S.506, G.507, G.508, Q.509, W.510, G.511, A.512, A.613, R.615, I.616, L.617, N.618, T.621, A.622, Q.625, A.687, K.688, G.689, V.690, G.691, E.692
- Ligands: MOS.15
20 PLIP interactions:18 interactions with chain C, 2 interactions with chain A- Hydrophobic interactions: C:A.512
- Hydrogen bonds: C:G.241, C:F.242, C:G.507, C:G.511, C:A.512, C:R.615, C:L.617, C:N.618, C:T.621, C:Q.625, C:V.690, C:G.691, A:Q.157
- Water bridges: C:R.350, C:T.470, C:T.470, C:T.470, C:N.513, A:Q.157
- 1 x MOS: DIOXOTHIOMOLYBDENUM(VI) ION(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.26: 3 residues within 4Å:- Chain C: W.41, I.234, D.497
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:D.497, C:D.497
GOL.27: 8 residues within 4Å:- Chain C: P.283, T.315, P.316, E.317, T.318, N.347, A.348, P.352
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:T.318, C:T.318, C:N.347
GOL.28: 6 residues within 4Å:- Chain C: I.25, L.29, Y.237, Y.473, A.492, V.493
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:Y.237, C:V.493, C:V.493
- Water bridges: C:I.25, C:D.26
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Correia, M.A. et al., The Escherichia Coli Periplasmic Aldehyde Oxidoreductase is an Exceptional Member of the Xanthine Oxidase Family of Molybdoenzymes. Acs Chem.Biol. (2016)
- Release Date
- 2016-09-28
- Peptides
- Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA: A
Aldehyde oxidoreductase FAD-binding subunit PaoB: B
Aldehyde oxidoreductase molybdenum-binding subunit PaoC: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 8 x IOD: IODIDE ION(Non-functional Binders)
- 3 x ACT: ACETATE ION(Non-functional Binders)
- 10 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 1 x MCN: PTERIN CYTOSINE DINUCLEOTIDE(Non-covalent)
- 1 x MOS: DIOXOTHIOMOLYBDENUM(VI) ION(Non-covalent)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Correia, M.A. et al., The Escherichia Coli Periplasmic Aldehyde Oxidoreductase is an Exceptional Member of the Xanthine Oxidase Family of Molybdoenzymes. Acs Chem.Biol. (2016)
- Release Date
- 2016-09-28
- Peptides
- Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA: A
Aldehyde oxidoreductase FAD-binding subunit PaoB: B
Aldehyde oxidoreductase molybdenum-binding subunit PaoC: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C