SMTL ID : 5gjc.1

Zika virus NS3 helicase in complex with ATP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: T.26, D.110, E.111 Ligands: ATP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.26, A:E.111, H2O.1, H2O.2

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 12 residues within 4Å: Chain A: P.21, G.22, A.23, G.24, K.25, T.26, R.27, E.111, N.155, R.284, R.287 Ligands: MN.1 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:G.22, A:G.22, A:A.23, A:G.24, A:K.25, A:T.26, A:R.27, A:R.27, A:N.155, A:R.284, A:R.287 Water bridges: A:K.25, A:K.25, A:K.25, A:Q.280, A:R.284, A:R.284 Salt bridges: A:K.25, A:K.25, A:R.287, A:R.287, A:R.287

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tian, H.L. et al., Structural basis of Zika virus helicase in recognizing its substrates. Protein Cell (2016)

Release Date

2016-07-20

Peptides

NS3 helicase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NS3 helicase