SMTL ID : 5gkr.1 (1 other biounit)

Crystal structure of SLE patient-derived anti-DNA antibody in complex with oligonucleotide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DT- DT- DT- DT: DNA (5'-D(P*TP*TP*TP*T)-3')(Non-covalent)

DT-DT-DT-DT.1: 14 residues within 4Å: Chain A: F.33, Y.50, Y.52, S.54, G.55, S.56, N.58, H.98, R.99, N.100, W.101 Chain B: Y.93, Y.97, Y.99 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakakibara, S. et al., Clonal evolution and antigen recognition of anti-nuclear antibodies in acute systemic lupus erythematosus. Sci Rep (2017)

Release Date

2017-07-05

Peptides

IgG2, Fab (heavy chain): A
lambda, Fab (light chain): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

IgG2, Fab (heavy chain)

lambda, Fab (light chain)

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