SMTL ID : 5gkz.1

Structure of RyR1 in a closed state (C3 conformer)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-4-4-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.4958, C.4961, H.4978, H.4983 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.4958, A:C.4961, A:H.4978, A:H.4983 ZN.2: 4 residues within 4Å: Chain C: C.4958, C.4961, H.4978, H.4983 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.4958, C:C.4961, C:H.4978, C:H.4983 ZN.3: 4 residues within 4Å: Chain E: C.4958, C.4961, H.4978, H.4983 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.4958, E:C.4961, E:H.4978, E:H.4983 ZN.4: 4 residues within 4Å: Chain G: C.4958, C.4961, H.4978, H.4983 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:C.4958, G:C.4961, G:H.4978, G:H.4983

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bai, X.C. et al., The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening. Cell Res. (2016)

Release Date

2016-08-24

Peptides

Ryanodine receptor 1: ACEG
Peptidyl-prolyl cis-trans isomerase FKBP1A: BDFH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

G
G

B
B

D
D

F
F

H
H

Membrane

We predict this structure to be a membrane protein.
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Ryanodine receptor 1

Peptidyl-prolyl cis-trans isomerase FKBP1A

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