SMTL ID : 5goy.1

The crystal structure of human cytosolic methionyl-tRNA synthetase in complex with methionine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.171, C.174, C.217, C.220, S.222 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.171, A:C.174, A:C.217, A:C.220 ZN.2: 4 residues within 4Å: Chain A: C.187, C.190, C.200, C.203 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.187, A:C.190, A:C.200, A:C.203

1 x MET: METHIONINE(Non-covalent)

MET.3: 10 residues within 4Å: Chain A: L.54, P.55, Y.56, D.94, W.300, A.303, T.304, Y.307, N.338, H.342 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:W.300 Hydrogen bonds: A:L.54, A:Y.56, A:D.94, A:N.338, M.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, H.J. et al., The crystal structure of human cytosolic methionyl-tRNA synthetase in complex with methionine. To be published

Release Date

2017-08-02

Peptides

Methionine--tRNA ligase, cytoplasmic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Methionine--tRNA ligase, cytoplasmic

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