SMTL ID : 5grm.1

Crystal structure of rat STING in complex with cyclic GMP-AMP with 2'5'and 3'5'phosphodiester linkage(2'3'-cGAMP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

1 x 1SY: cGAMP(Non-covalent)

1SY.1: 18 residues within 4Å: Chain A: S.31, Y.32, G.35, Y.36, R.107, Y.109, E.129, T.132, P.133 Chain B: S.31, Y.32, G.35, Y.36, R.107, A.108, Y.109, T.132, P.133 29 PLIP interactions: 16 interactions with chain B, 13 interactions with chain A Hydrogen bonds: B:R.107, B:R.107, B:A.108, B:T.132, B:T.132, B:T.132, A:R.107, A:T.132, A:T.132, A:T.132 Water bridges: B:S.31, B:R.101, B:R.101, B:R.101, B:S.110, B:S.110, B:T.136, A:R.107, A:S.110, A:T.132 Salt bridges: B:R.107, A:R.107, A:E.129 pi-Stacking: B:Y.36, A:Y.36 pi-Cation interactions: B:R.107, A:Y.36, A:R.107, A:R.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Crystal structure of rat STING in complex with cyclic GMP-AMP with 2'5'and 3'5'phosphodiester linkage(2'3'-cGAMP). To Be Published

Release Date

2017-10-25

Peptides

Stimulator of interferon genes protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Stimulator of interferon genes protein