SMTL ID : 5gv4.1

Y74COX MUTANT OF PLASMODIUM FALCIPARUM TRIOSEPHOSPHATE ISOMERASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

homo-dimer

Ligands

2 x PGA: 2-PHOSPHOGLYCOLIC ACID(Non-covalent)

PGA.1: 13 residues within 4Å: Chain A: N.10, K.12, H.95, E.165, A.169, I.170, G.171, G.210, S.211, L.230, V.231, G.232, N.233 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.10, A:E.165, A:G.171, A:S.211, A:G.232, A:N.233 Water bridges: A:K.12, A:K.12, A:G.173, A:G.210, A:V.212, A:A.234 Salt bridges: A:K.12, A:K.12, A:H.95 PGA.7: 13 residues within 4Å: Chain B: N.10, K.12, H.95, E.165, A.169, I.170, G.171, G.210, S.211, L.230, V.231, G.232, N.233 15 PLIP interactions: 15 interactions with chain B Hydrogen bonds: B:N.10, B:E.165, B:G.171, B:S.211, B:G.232, B:N.233 Water bridges: B:K.12, B:K.12, B:G.173, B:G.210, B:V.212, B:A.234 Salt bridges: B:K.12, B:K.12, B:H.95

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: L.131, R.134, W.168, Q.180 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.180, A:Q.180 EDO.3: 2 residues within 4Å: Chain A: T.172, K.174 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.174, A:K.174 EDO.4: 3 residues within 4Å: Chain A: T.177, P.178, E.179 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.179 EDO.5: 5 residues within 4Å: Chain A: P.34, S.57, K.58, S.60, E.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.89 Water bridges: A:S.60 EDO.6: 7 residues within 4Å: Chain A: W.11, N.14, G.15, S.19, I.20, L.23, L.236 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.19 Water bridges: A:W.11, A:H.47 EDO.8: 4 residues within 4Å: Chain B: L.131, R.134, W.168, Q.180 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.180, B:Q.180 EDO.9: 2 residues within 4Å: Chain B: T.172, K.174 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.174, B:K.174 EDO.10: 3 residues within 4Å: Chain B: T.177, P.178, E.179 2 PLIP interactions: 2 interactions with chain B Water bridges: B:T.177, B:E.179 EDO.11: 5 residues within 4Å: Chain B: P.34, S.57, K.58, S.60, E.89 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.89 Water bridges: B:S.60 EDO.12: 7 residues within 4Å: Chain B: W.11, N.14, G.15, S.19, I.20, L.23, L.236 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.19 Water bridges: B:W.11, B:N.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pareek, V. et al., Y74COX MUTANT OF PLASMODIUM FALCIPARUM TRIOSEPHOSPHATE ISOMERASE. To Be Published

Release Date

2017-09-06

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Triosephosphate isomerase

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