SMTL ID : 5gvh.1

Structure of FabK from Thermotoga maritima

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 7 residues within 4Å: Chain A: I.212, V.213, K.214, A.215, A.281, G.282, I.284 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.215 Water bridges: A:I.284 NA.3: 7 residues within 4Å: Chain B: I.212, V.213, K.214, A.215, A.281, G.282, I.284 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.281 Water bridges: B:I.284

2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 20 residues within 4Å: Chain A: G.20, G.21, M.22, A.23, N.71, I.73, G.97, E.139, S.143, G.144, G.171, G.172, Q.191, M.192, G.193, T.194, Y.208, M.276, G.278, S.280 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:M.22, A:M.276 Hydrogen bonds: A:G.21, A:A.23, A:N.71, A:N.71, A:E.139, A:G.144, A:G.144, A:G.171, A:G.172, A:I.173, A:Q.191, A:G.193, A:T.194, A:G.278, A:S.280 Water bridges: A:A.98, A:A.98, A:I.173, A:I.173, A:R.195 FMN.4: 20 residues within 4Å: Chain B: G.20, G.21, M.22, A.23, N.71, I.73, G.97, E.139, S.143, G.144, G.171, G.172, Q.191, M.192, G.193, T.194, Y.208, M.276, G.278, S.280 22 PLIP interactions: 22 interactions with chain B Hydrophobic interactions: B:M.22, B:M.276 Hydrogen bonds: B:G.21, B:A.23, B:N.71, B:N.71, B:G.144, B:G.144, B:G.171, B:G.172, B:I.173, B:Q.191, B:G.193, B:T.194, B:T.194, B:G.278, B:S.280 Water bridges: B:A.98, B:A.98, B:I.173, B:I.173, B:R.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ha, B.H. et al., Structural and biochemical characterization of FabK from Thermotoga maritima. Biochem. Biophys. Res. Commun. (2017)

Release Date

2017-06-07

Peptides

Enoyl-[acyl-carrier-protein] reductase [FMN]: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Enoyl-[acyl-carrier-protein] reductase [FMN]