SMTL ID : 5gzp.1

Y74COX MUTANT OF PLASMODIUM FALCIPARUM TRIOSEPHOSPHATE ISOMERASE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

homo-dimer

Ligands

2 x PGA: 2-PHOSPHOGLYCOLIC ACID(Non-covalent)

PGA.1: 13 residues within 4Å: Chain A: N.10, K.12, H.95, E.165, A.169, I.170, G.171, G.210, S.211, L.230, V.231, G.232, N.233 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:N.10, A:E.165, A:G.171, A:S.211, A:G.232, A:N.233 Water bridges: A:K.12, A:K.12, A:G.173, A:V.212, A:V.212, A:A.234 Salt bridges: A:K.12, A:K.12, A:H.95 PGA.9: 13 residues within 4Å: Chain B: N.10, K.12, H.95, E.165, A.169, I.170, G.171, G.210, S.211, L.230, V.231, G.232, N.233 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:N.10, B:G.171, B:S.211, B:G.232, B:N.233 Water bridges: B:K.12, B:K.12, B:G.173, B:V.212, B:V.212, B:A.234 Salt bridges: B:K.12, B:K.12, B:H.95

11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: R.52, L.55, S.57 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.52, A:R.52 EDO.3: 1 residues within 4Å: Chain A: T.177 No protein-ligand interaction detected (PLIP) EDO.4: 6 residues within 4Å: Chain A: S.45, G.76, V.78 Chain B: S.45, G.76, V.78 8 PLIP interactions: 3 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:S.45, A:S.45, A:S.45, A:G.76 Water bridges: B:S.45, B:V.78, A:S.45, A:V.78 EDO.5: 3 residues within 4Å: Chain A: Y.5, I.221, Q.222 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.5 Water bridges: A:Y.5, A:Q.222, A:S.246 EDO.6: 3 residues within 4Å: Chain A: E.81, K.84, D.85 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.85 Water bridges: A:D.85, A:D.85 EDO.7: 3 residues within 4Å: Chain A: K.237, E.238, S.239 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.238, A:S.239, A:S.239 EDO.8: 7 residues within 4Å: Chain A: W.11, N.14, G.15, S.19, I.20, L.23, L.236 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.19 Water bridges: A:W.11, A:H.47 EDO.10: 3 residues within 4Å: Chain B: K.237, E.238, S.239 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.238, B:S.239 Water bridges: B:S.239 EDO.11: 3 residues within 4Å: Chain B: T.177, E.179, Q.180 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.177, B:E.179 EDO.12: 5 residues within 4Å: Chain B: R.52, S.57, F.59, S.60, E.89 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.52 EDO.13: 3 residues within 4Å: Chain B: T.172, G.173, K.174 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.174, B:K.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pareek, V. et al., Y74COX MUTANT OF PLASMODIUM FALCIPARUM TRIOSEPHOSPHATE ISOMERASE. To Be Published

Release Date

2017-10-04

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Triosephosphate isomerase

Related Entries With Identical Sequence