SMTL ID : 5gzx.1

The complex structure of D-2-haloacid dehalogenase mutant with D-2-CPA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-tetramer

Ligands

4 x RCI: (R)-2-Chloropropionic acid(Non-covalent)

RCI.1: 11 residues within 4Å: Chain A: W.48, G.50, V.51, I.52, N.131, Y.134, N.203, S.204, M.284, L.285, L.288 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.48, A:Y.134 Hydrogen bonds: A:V.51, A:N.203, A:S.204 RCI.2: 10 residues within 4Å: Chain B: W.48, G.50, V.51, I.52, N.131, N.203, S.204, M.284, L.285, L.288 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:W.48, B:L.285 Hydrogen bonds: B:V.51, B:N.203, B:S.204, B:N.205 RCI.3: 9 residues within 4Å: Chain C: W.48, G.50, V.51, I.52, N.131, N.203, S.204, L.285, L.288 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:W.48, C:L.285 Hydrogen bonds: C:V.51, C:N.203, C:S.204 RCI.4: 11 residues within 4Å: Chain D: W.48, G.50, V.51, I.52, N.131, Y.134, N.203, S.204, M.284, L.285, L.288 6 PLIP interactions: 6 interactions with chain D Hydrophobic interactions: D:W.48, D:Y.134, D:L.285 Hydrogen bonds: D:V.51, D:N.203, D:S.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., The complex structure of D-2-haloacid dehalogenase mutant with D-2-CPA. To Be Published

Release Date

2017-10-04

Peptides

(R)-2-haloacid dehalogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

(R)-2-haloacid dehalogenase