SMTL ID : 5h2d.1

Crystal structure of Osh1 ORD domain in complex with ergosterol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x ERG: ERGOSTEROL(Non-covalent)

ERG.1: 17 residues within 4Å: Chain A: M.57, L.62, L.72, R.75, D.79, Y.110, R.116, V.117, A.118, K.119, F.178, F.180, H.182, K.205, N.208, V.210, V.220 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.62, A:L.72, A:Y.110, A:V.117, A:F.180, A:V.220 Hydrogen bonds: A:K.205 Water bridges: A:D.79, A:K.205

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: R.176, G.212, I.213, L.214, L.215, R.244 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.212, A:L.214, A:L.215 Water bridges: A:I.213, A:I.213 Salt bridges: A:R.176, A:R.244 SO4.3: 4 residues within 4Å: Chain A: R.366, Y.367, D.368, E.369 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.367, A:D.368, A:E.369 SO4.4: 3 residues within 4Å: Chain A: R.382, R.385, K.386 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.382, A:R.385, A:K.386 SO4.5: 4 residues within 4Å: Chain A: R.59, H.147, H.148, R.385 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:R.59 Water bridges: A:R.59, A:H.147, A:Q.381, A:Q.381, A:Q.381, A:R.382 Salt bridges: A:H.147, A:H.148, A:R.385

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Manik, M.K. et al., Structure of Yeast OSBP-Related Protein Osh1 Reveals Key Determinants for Lipid Transport and Protein Targeting at the Nucleus-Vacuole Junction. Structure (2017)

Release Date

2017-05-10

Peptides

KLLA0C04147p: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

KLLA0C04147p

Related Entries With Identical Sequence