SMTL ID : 5h5q.1

Crystal structure of human GPX4 in complex with GXpep-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: K.30, Y.31, F.34, R.68 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.68 GOL.2: 5 residues within 4Å: Chain A: R.11, S.12, E.15 Chain B: X.1, C.2 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.15, A:E.15, B:C.2 Water bridges: A:S.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakamoto, K. et al., Discovery of GPX4 inhibitory peptides from random peptide T7 phage display and subsequent structural analysis. Biochem. Biophys. Res. Commun. (2017)

Release Date

2016-12-07

Peptides

Phospholipid hydroperoxide glutathione peroxidase, mitochondrial: A
GXpep-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phospholipid hydroperoxide glutathione peroxidase, mitochondrial

GXpep-1

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