SMTL ID : 5h7k.1

Crystal structure of Elongation factor 2 GDP-form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: H.32, D.34, H.35, G.36, K.37, T.38, T.39, R.71, H.101, N.151, K.152, D.154, R.155, S.207, A.208, Y.209 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:D.34, A:D.34, A:H.35, A:G.36, A:K.37, A:T.38, A:T.38, A:T.39, A:T.39, A:N.151, A:K.152, A:K.152, A:S.207, A:A.208, A:Y.209 Water bridges: A:T.38, A:T.39, A:R.71, A:R.71, A:H.101, A:H.101, A:R.155 Salt bridges: A:R.71, A:H.101, A:D.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tanzawa, T. et al., The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion. Nucleic Acids Res. (2018)

Release Date

2018-02-21

Peptides

Elongation factor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Elongation factor 2