SMTL ID : 5hbv.1

Complex structure of Fab35 and mouse nAChR alpha1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN.1: 14 residues within 4Å: Chain A: T.6, A.7, T.8, S.9, E.41, L.42 Chain B: N.142, K.146, W.185, K.186, H.187, W.188, T.203, H.205 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:S.9, B:H.187, B:T.203 Hydrophobic interactions: B:T.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noridomi, K. et al., Structural insights into the molecular mechanisms of myasthenia gravis and their therapeutic implications. Elife (2017)

Release Date

2017-05-03

Peptides

Alpha-bungarotoxin isoform V31: A
Acetylcholine receptor subunit alpha 1: B
Fab35, Light Chain: C
Fab35, Heavy Chain: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Alpha-bungarotoxin isoform V31

Acetylcholine receptor subunit alpha 1

Fab35, Light Chain

Fab35, Heavy Chain

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