SMTL ID : 5hdo.3 (3 other biounits)

Crystal structure of a nanobody raised against urokinase-type plasminogen activator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.52, S.54, G.56, S.57 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.52, A:S.54, A:G.56, A:S.57, A:S.57, A:S.57 Water bridges: A:S.52, A:S.54

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: S.49 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kromann-Hansen, T. et al., A Camelid-derived Antibody Fragment Targeting the Active Site of a Serine Protease Balances between Inhibitor and Substrate Behavior. J.Biol.Chem. (2016)

Release Date

2016-06-01

Peptides

Anti-HCV NS3/4A serine protease immoglobulin heavy chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Anti-HCV NS3/4A serine protease immoglobulin heavy chain

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