SMTL ID : 5heb.1

The third PDZ domain from the synaptic protein PSD-95 in complex with a C-terminal peptide derived from CRIPT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x ASN- TYR- LYS- GLN- THR- SER- VAL: Cysteine-rich PDZ-binding protein(Non-covalent)

ASN-TYR-LYS-GLN-THR-SER-VAL.1: 18 residues within 4Å: Chain A: R.22, G.26, L.27, G.28, F.29, N.30, I.31, V.32, G.33, E.35, S.43, H.76, E.77, A.80, L.83, K.84, F.104 Ligands: GOL.3 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:F.29, A:V.32, A:H.76, A:A.80, A:F.104 Hydrogen bonds: A:L.27, A:G.28, A:F.29, A:F.29, A:F.29, A:N.30, A:I.31, A:I.31, A:E.35, A:E.35, A:S.43, A:H.76, A:E.77, A:K.84 Water bridges: A:E.35, A:E.35

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: E.105, A.106, N.107, T.118, D.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.106, A:N.107 GOL.3: 4 residues within 4Å: Chain A: G.26, K.84 Ligands: ASN-TYR-LYS-GLN-THR-SER-VAL.1, ASN-TYR-LYS-GLN-THR-SER-VAL.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Raman, A.S. et al., Origins of Allostery and Evolvability in Proteins: A Case Study. Cell(Cambridge,Mass.) (2016)

Release Date

2016-11-16

Peptides

Disks large homolog 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Disks large homolog 4

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