Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 5hei.4
(3 other biounits)
Structure of B. megaterium NfrA2
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.84 Å
Oligo State
homo-dimer
Ligands
2 x
FMN
:
FLAVIN MONONUCLEOTIDE
(Non-covalent)
FMN.1:
20 residues within 4Å:
Chain A:
H.11
,
R.12
,
S.13
,
R.15
,
Q.67
,
W.69
,
V.132
,
P.133
,
I.134
,
G.135
,
G.136
,
S.158
,
K.172
,
R.174
Chain B:
A.38
,
S.39
,
S.40
,
N.42
,
I.115
Ligands:
MPD.4
18
PLIP interactions
:
14 interactions with chain A
,
4 interactions with chain B
Hydrophobic interactions:
A:P.133
,
B:A.38
,
B:I.115
Hydrogen bonds:
A:S.13
,
A:S.13
,
A:S.13
,
A:R.15
,
A:Q.67
,
A:Q.67
,
A:G.135
,
A:G.136
,
A:K.172
,
B:S.39
Water bridges:
A:Y.230
,
B:I.41
Salt bridges:
A:H.11
,
A:K.172
,
A:R.174
FMN.3:
20 residues within 4Å:
Chain A:
A.38
,
S.39
,
S.40
,
N.42
,
T.111
,
I.115
Chain B:
H.11
,
R.12
,
S.13
,
R.15
,
Q.67
,
W.69
,
V.132
,
P.133
,
I.134
,
G.135
,
G.136
,
S.158
,
K.172
,
R.174
19
PLIP interactions
:
13 interactions with chain B
,
6 interactions with chain A
Hydrophobic interactions:
B:P.133
,
A:A.38
,
A:T.111
,
A:I.115
Hydrogen bonds:
B:S.13
,
B:S.13
,
B:S.13
,
B:R.15
,
B:Q.67
,
B:Q.67
,
B:G.135
,
B:G.136
,
B:K.172
,
A:S.39
Salt bridges:
B:H.11
,
B:K.172
,
B:R.174
Water bridges:
A:I.41
,
A:I.41
2 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.2:
4 residues within 4Å:
Chain A:
K.172
,
M.205
,
R.215
Ligands:
MPD.4
4
PLIP interactions
:
4 interactions with chain A
Water bridges:
A:K.172
,
A:R.215
Salt bridges:
A:K.172
,
A:R.215
SO4.5:
4 residues within 4Å:
Chain A:
R.234
,
K.246
Chain B:
R.234
,
K.246
5
PLIP interactions
:
2 interactions with chain B
,
3 interactions with chain A
Salt bridges:
B:R.234
,
B:K.246
,
A:R.234
Water bridges:
A:R.234
,
A:R.234
1 x
MPD
:
(4S)-2-METHYL-2,4-PENTANEDIOL
(Non-functional Binders)
MPD.4:
3 residues within 4Å:
Chain B:
I.41
Ligands:
FMN.1
,
SO4.2
3
PLIP interactions
:
3 interactions with chain B
Hydrophobic interactions:
B:I.41
Hydrogen bonds:
B:I.41
Water bridges:
B:I.41
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Carles, L. et al., Functional and structural characterization of two Bacillus megaterium nitroreductases biotransforming the herbicide mesotrione. Biochem.J. (2016)
Release Date
2016-04-06
Peptides
NfrA2:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
B
H
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
NfrA2
Toggle Identical (AB)
Related Entries With Identical Sequence
5hei.1
|
5hei.2
|
5hei.3
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme