SMTL ID : 5hf2.1

Staphylococcus aureus Dihydrofolate Reductase complexed with cyclized alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-5'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1175)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x XNP: Tricyclic NADPH(Non-covalent)

XNP.1: 23 residues within 4Å: Chain A: I.14, G.15, N.18, Q.19, L.20, G.43, R.44, K.45, T.46, S.49, L.62, T.63, S.64, H.77, I.79, G.93, G.94, Q.95, T.96, L.97, E.100, T.121 Ligands: U75.2 28 PLIP interactions: 28 interactions with chain A Hydrogen bonds: A:I.14, A:N.18, A:N.18, A:G.43, A:R.44, A:R.44, A:K.45, A:T.46, A:S.49, A:T.63, A:S.64, A:G.94, A:Q.95, A:T.96, A:L.97, A:E.100 Water bridges: A:K.45, A:T.63, A:T.63, A:D.65, A:I.79, A:I.79, A:T.96, A:T.96, A:T.121, A:T.121 Salt bridges: A:R.44, A:K.45

1 x U75: 4-[3-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]prop-2-ynyl]-5-methoxy-phenyl]benzoic acid(Non-covalent)

U75.2: 16 residues within 4Å: Chain A: L.5, V.6, A.7, N.18, Q.19, L.20, D.27, L.28, V.31, T.46, S.49, I.50, L.54, F.92, T.111 Ligands: XNP.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.20, A:L.20, A:T.46, A:I.50, A:L.54, A:F.92, A:F.92, A:F.92 Hydrogen bonds: A:L.5, A:T.111, A:T.111 Water bridges: A:A.7, A:A.7 Salt bridges: A:D.27

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: R.12, P.125, Y.126, F.128 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.126, A:Y.126 Water bridges: A:Y.126, A:Y.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reeve, S.M. et al., Staphylococcus aureus Dihydrofolate Reductase complexed with cyclized alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-5'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1175). To Be Published

Release Date

2017-01-18

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Dihydrofolate reductase

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