SMTL ID : 5hmn.1 (2 other biounits)

Crystal structure of an aminoglycoside acetyltransferase HMB0005 from an uncultured soil metagenomic sample, unknown active site density modeled as polyethylene glycol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

homo-dimer

Ligands

2 x COA: COENZYME A(Non-covalent)

COA.1: 20 residues within 4Å: Chain A: A.28, F.29, L.89, A.90, V.91, R.96, R.97, R.98, G.99, I.100, A.101, T.102, V.122, E.129, P.132, A.133, A.135, L.136, Y.137, K.139 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:F.29, A:A.101, A:A.133 Hydrogen bonds: A:L.89, A:V.91, A:R.96, A:R.97, A:R.97, A:R.98, A:G.99, A:I.100, A:A.101, A:T.102 Water bridges: A:H.95, A:R.96, A:R.96, A:E.129, A:E.129 Salt bridges: A:R.97 pi-Cation interactions: A:R.97, A:R.97 COA.2: 17 residues within 4Å: Chain B: F.29, D.88, L.89, A.90, V.91, R.96, R.97, R.98, G.99, I.100, A.101, T.102, D.130, P.132, A.133, A.135, L.136 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:F.29, B:V.91, B:A.101, B:P.132, B:A.133 Hydrogen bonds: B:L.89, B:V.91, B:R.96, B:R.97, B:R.97, B:G.99, B:I.100, B:A.101, B:T.102, B:T.102, B:T.102 Water bridges: B:E.129 Salt bridges: B:R.97 pi-Cation interactions: B:R.97, B:R.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Z., Crystal structure of an aminoglycoside acetyltransferase HMB0005 from an uncultured soil metagenomic sample, unknown active site density modeled as polyethylene glycol. To Be Published

Release Date

2016-02-17

Peptides

AAC3-I: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
E

AAC3-I

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