SMTL ID : 5hnu.1

Crystal Structure of AKR1C3 complexed with octyl gallate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 29 residues within 4Å: Chain A: G.17, T.18, Y.19, D.45, Y.50, K.79, H.112, S.161, N.162, Q.185, Y.211, S.212, A.213, L.214, G.215, S.216, Q.217, L.231, A.248, L.263, A.264, K.265, S.266, Y.267, N.268, R.271, Q.274, N.275, F.301 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:Y.211, A:Y.211, A:Y.211, A:F.301 Hydrogen bonds: A:T.18, A:Y.19, A:Y.19, A:D.45, A:D.45, A:Y.50, A:S.161, A:N.162, A:Q.185, A:S.212, A:L.214, A:S.216, A:Q.217, A:Q.217, A:Q.217, A:K.265, A:Y.267, A:Q.274, A:N.275 Water bridges: A:S.212, A:A.213, A:A.213, A:R.271, A:R.271 Salt bridges: A:K.265, A:R.271 pi-Cation interactions: A:R.271 NAP.3: 30 residues within 4Å: Chain B: G.17, T.18, Y.19, D.45, Y.50, K.79, H.112, S.161, N.162, Q.185, Y.211, S.212, A.213, L.214, G.215, S.216, Q.217, L.231, A.248, L.263, A.264, K.265, S.266, Y.267, N.268, R.271, Q.274, N.275, F.301 Ligands: 65D.2 29 PLIP interactions: 29 interactions with chain B Hydrophobic interactions: B:Y.211, B:Y.211, B:Y.211, B:F.301 Hydrogen bonds: B:T.18, B:Y.19, B:D.45, B:D.45, B:Y.50, B:S.161, B:N.162, B:Q.185, B:S.212, B:L.214, B:S.216, B:Q.217, B:Q.217, B:K.265, B:Y.267, B:N.268, B:Q.274, B:N.275 Water bridges: B:S.212, B:A.213, B:A.213, B:R.271 Salt bridges: B:K.265, B:R.271 pi-Cation interactions: B:R.271

1 x 65D: octyl 3,4,5-trihydroxybenzoate(Non-covalent)

65D.2: 10 residues within 4Å: Chain B: Y.19, L.49, Y.50, H.112, R.221, W.222, F.301, S.305, F.306 Ligands: NAP.3 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:Y.19, B:L.49, B:W.222, B:W.222, B:W.222, B:F.306 Hydrogen bonds: B:Y.50, B:H.112 Salt bridges: B:R.221 pi-Stacking: B:F.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, C. et al., Crystal Structure of AKR1C3 complexed with octyl gallte. To Be Published

Release Date

2017-01-25

Peptides

Aldo-keto reductase family 1 member C3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Aldo-keto reductase family 1 member C3

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