SMTL ID : 5ho8.1

DISCOVERY OF NOVEL 7-AZAINDOLES AS PDK1 INHIBITORS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 63E: 4-butyl-6-(1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-2-amine(Non-covalent)

63E.1: 13 residues within 4Å: Chain A: L.38, E.40, V.46, A.59, K.61, L.109, S.110, Y.111, A.112, E.159, L.162, T.172, D.173 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.38, A:V.46, A:L.162 Hydrogen bonds: A:S.110, A:A.112, A:T.172, A:T.172, A:D.173 Salt bridges: A:D.173

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.56 Ligands: SO4.5 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.56 SO4.3: 5 residues within 4Å: Chain A: K.26, R.81, T.98, F.99, Q.100 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.98, A:T.98, A:Q.100 Water bridges: A:Q.100 Salt bridges: A:K.26, A:R.81 SO4.4: 2 residues within 4Å: Chain A: K.33, R.50 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.33, A:R.50 SO4.5: 3 residues within 4Å: Chain A: K.94, Y.96 Ligands: SO4.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.96 Salt bridges: A:K.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wucherer-Plietker, M. et al., Discovery of novel 7-azaindoles as PDK1 inhibitors. Bioorg.Med.Chem.Lett. (2016)

Release Date

2016-06-08

Peptides

3-phosphoinositide-dependent protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-phosphoinositide-dependent protein kinase 1

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