SMTL ID : 5hp6.1

Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: S.649, D.651, I.686, K.688, D.826, E.827 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:S.649, A:D.651, A:K.688, A:D.826, A:E.827 CA.2: 1 residues within 4Å: Chain A: H.395 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.395, H2O.3, H2O.5, H2O.8, H2O.8

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 9 residues within 4Å: Chain A: H.54, D.55, W.126, I.237, D.238, E.304, L.326, Y.332, H.395 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.54, A:D.238, A:Y.332, A:H.395 Water bridges: A:S.255, A:E.304, A:E.304, A:E.304

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 3 residues within 4Å: Chain A: D.61, W.132, Y.146 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lansky, S. et al., Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state). To Be Published

Release Date

2017-02-01

Peptides

Extracellular arabinanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Extracellular arabinanase

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