SMTL ID : 5hti.1

Crystal structure of c-Met kinase domain in complex with LXM108

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x 66L: N-[3-fluoro-4-({7-[2-(morpholin-4-yl)ethoxy]-1,6-naphthyridin-4-yl}oxy)phenyl]-N'-(4-fluorophenyl)cyclopropane-1,1-dicarboxamide(Non-covalent)

66L.1: 24 residues within 4Å: Chain A: I.57, V.65, A.81, K.83, E.100, M.104, F.107, V.112, L.113, L.130, P.131, Y.132, M.133, K.134, H.135, G.136, L.168, F.173, H.175, M.184, V.193, A.194, D.195, F.196 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:A.81, A:E.100, A:F.107, A:V.112, A:L.113, A:L.130, A:Y.132, A:F.173, A:D.195 Hydrogen bonds: A:M.133, A:D.195 Water bridges: A:E.100 pi-Stacking: A:F.196

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Y.C. et al., Crystal structure of c-Met kinase domain in complex with LXM108. to be published

Release Date

2017-02-01

Peptides

Hepatocyte growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hepatocyte growth factor receptor

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