SMTL ID : 5hw0.1

Erwinia chrysanthemi L-asparaginase + Glutamic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-tetramer

Ligands

4 x GLU: GLUTAMIC ACID(Non-covalent)

GLU.1: 10 residues within 4Å: Chain A: G.15, T.16, A.62, S.63, E.64, G.95, T.96, D.97, A.121 Chain B: S.255 12 PLIP interactions: 11 interactions with chain A, 1 interactions with chain B, Hydrogen bonds: A:T.16, A:S.63, A:E.64, A:T.96, A:T.96, A:D.97, A:D.97, B:S.255 Water bridges: A:G.15, A:I.17, A:A.121, A:K.169 GLU.2: 10 residues within 4Å: Chain A: S.255 Chain B: G.15, T.16, A.62, S.63, E.64, G.95, T.96, D.97, A.121 12 PLIP interactions: 11 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:T.16 Hydrogen bonds: B:T.16, B:S.63, B:E.64, B:T.96, B:D.97, A:S.255 Water bridges: B:G.15, B:G.15, B:I.17, B:A.121, B:K.169 GLU.3: 10 residues within 4Å: Chain C: G.15, T.16, A.62, S.63, E.64, G.95, T.96, D.97, A.121 Chain D: S.255 11 PLIP interactions: 10 interactions with chain C, 1 interactions with chain D, Hydrophobic interactions: C:T.16 Hydrogen bonds: C:T.16, C:S.63, C:E.64, C:T.96, C:D.97, D:S.255 Water bridges: C:G.15, C:G.15, C:I.17, C:A.121 GLU.4: 12 residues within 4Å: Chain C: S.255 Chain D: G.15, T.16, Y.30, A.32, A.62, S.63, E.64, G.95, T.96, D.97, A.121 15 PLIP interactions: 14 interactions with chain D, 1 interactions with chain C, Hydrogen bonds: D:T.16, D:T.16, D:S.63, D:E.64, D:E.64, D:T.96, D:D.97, D:D.97, D:A.121, C:S.255 Water bridges: D:H.94, D:A.121, D:K.169, D:K.169 Salt bridges: D:K.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, H.A. et al., Structural Insight into Substrate Selectivity of Erwinia chrysanthemi l-Asparaginase. Biochemistry (2016)

Release Date

2016-04-06

Peptides

L-asparaginase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

L-asparaginase

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