- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.29 Å
- Oligo State
- monomer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 8 x MYS: PENTADECANE(Non-covalent)
MYS.5: 4 residues within 4Å:- Chain A: L.110, F.114, V.117
- Ligands: OLC.13
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.114, A:V.117
MYS.6: 5 residues within 4Å:- Chain A: I.120, N.258, V.259, A.262, V.265
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:I.120, A:I.120, A:N.258, A:V.259, A:A.262, A:V.265
MYS.7: 7 residues within 4Å:- Chain A: F.34, V.36, T.44, V.45, I.48, V.143
- Ligands: MYS.9
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:F.34, A:V.36, A:V.45, A:I.48, A:I.48, A:V.143, A:V.143
MYS.8: 4 residues within 4Å:- Chain A: W.283, Q.284, I.286, L.287
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:W.283, A:W.283, A:I.286, A:L.287
MYS.9: 7 residues within 4Å:- Chain A: I.55, I.136, L.139, R.140, G.243, V.247
- Ligands: MYS.7
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:I.55, A:V.247
MYS.10: 5 residues within 4Å:- Chain A: I.91, R.282, I.286, L.289, I.293
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:I.91, A:I.286, A:L.289, A:I.293
MYS.11: 5 residues within 4Å:- Chain A: V.259, I.294, S.298, R.300
- Ligands: MYS.12
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.259, A:I.294
MYS.12: 3 residues within 4Å:- Chain A: A.297, S.298
- Ligands: MYS.11
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:A.297
- 2 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
OLC.13: 7 residues within 4Å:- Chain A: V.107, F.111, F.114, V.130, L.134, W.141
- Ligands: MYS.5
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:V.107, A:F.114, A:F.114, A:L.134, A:L.134, A:W.141
OLC.14: 9 residues within 4Å:- Chain A: L.52, P.53, L.56, T.57, L.176, A.179, E.180, G.208, T.209
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.52, A:L.52, A:L.56, A:L.176
- Hydrogen bonds: A:T.57, A:G.208
- 1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liao, J. et al., Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger. Nat.Struct.Mol.Biol. (2016)
- Release Date
- 2016-05-11
- Peptides
- sodium,calcium exchanger: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.29 Å
- Oligo State
- monomer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 8 x MYS: PENTADECANE(Non-covalent)
- 2 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
- 1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liao, J. et al., Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger. Nat.Struct.Mol.Biol. (2016)
- Release Date
- 2016-05-11
- Peptides
- sodium,calcium exchanger: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.