SMTL ID : 5hyk.1

Crystal structure of the complex PPARalpha/AL26-29

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x 65W: 2-methyl-2-[4-(naphthalen-1-yl)phenoxy]propanoic acid(Non-covalent)

65W.1: 17 residues within 4Å: Chain A: F.77, C.80, Q.81, S.84, Y.118, F.122, I.158, M.159, H.244, V.248, I.251, K.252, A.258, A.259, L.260, L.264, Y.268 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.77, A:F.77, A:Q.81, A:F.122, A:I.158, A:I.158, A:V.248, A:I.251, A:I.251, A:K.252, A:A.258, A:L.260 Hydrogen bonds: A:S.84, A:Y.268 Salt bridges: A:H.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Capelli, D. et al., Structural basis for PPAR partial or full activation revealed by a novel ligand binding mode. Sci Rep (2016)

Release Date

2016-11-23

Peptides

Peroxisome proliferator-activated receptor alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor alpha