SMTL ID : 5hym.1

3-Hydroxybenzoate 6-hydroxylase from Rhodococcus jostii in complex with phosphatidylinositol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 29 residues within 4Å: Chain A: G.13, G.14, G.15, I.16, G.17, G.18, F.35, E.36, R.37, L.48, Q.49, R.110, V.132, T.133, V.134, M.162, D.163, G.164, A.185, R.187, G.293, D.294, Q.301, A.304, S.305, G.306, A.307, V.308 Ligands: CL.3 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:A.185, A:Q.301 Hydrogen bonds: A:G.14, A:G.15, A:G.17, A:G.18, A:R.37, A:R.37, A:Q.49, A:Q.49, A:R.110, A:R.110, A:V.134, A:V.134, A:D.294, A:G.306, A:A.307, A:V.308 Water bridges: A:L.165, A:L.165 pi-Cation interactions: A:R.110, A:R.110 FAD.4: 29 residues within 4Å: Chain B: G.13, G.14, G.15, I.16, G.17, G.18, F.35, E.36, R.37, L.48, Q.49, R.110, V.132, T.133, V.134, M.162, D.163, G.164, A.185, R.187, G.293, D.294, Q.301, A.304, S.305, G.306, A.307, V.308 Ligands: CL.6 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:A.185, B:Q.301 Hydrogen bonds: B:G.14, B:G.15, B:G.17, B:G.18, B:R.37, B:R.37, B:E.43, B:Q.49, B:Q.49, B:R.110, B:R.110, B:V.134, B:V.134, B:D.294, B:G.306, B:A.307, B:V.308 Water bridges: B:L.165, B:L.165 pi-Cation interactions: B:R.110, B:R.110

2 x T7X: Phosphatidylinositol(Non-covalent)

T7X.2: 16 residues within 4Å: Chain A: Q.49, Y.302, L.303, R.350, T.354, M.357, W.358, L.375, F.376, R.379, K.385, Y.386, W.389, W.391 Chain B: I.370, E.374 14 PLIP interactions: 13 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.303, A:T.354, A:W.358, A:W.358, A:L.375, A:F.376, A:Y.386, A:Y.386, A:Y.386, A:Y.386, A:W.391, B:I.370 Salt bridges: A:R.350, A:K.385 T7X.5: 16 residues within 4Å: Chain A: I.370, E.374 Chain B: Q.49, Y.302, L.303, R.350, T.354, M.357, W.358, L.375, F.376, R.379, K.385, Y.386, W.389, W.391 14 PLIP interactions: 13 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.303, B:T.354, B:W.358, B:W.358, B:L.375, B:F.376, B:Y.386, B:Y.386, B:Y.386, B:Y.386, B:W.391, A:I.370 Salt bridges: B:R.350, B:K.385

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 7 residues within 4Å: Chain A: P.299, L.300, Q.301, A.304, S.305, G.306 Ligands: FAD.1 Ligand excluded by PLIP CL.6: 7 residues within 4Å: Chain B: P.299, L.300, Q.301, A.304, S.305, G.306 Ligands: FAD.4 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montersino, S. et al., 3-Hydroxybenzoate 6-Hydroxylase from Rhodococcus jostii RHA1 Contains a Phosphatidylinositol Cofactor. Front Microbiol (2017)

Release Date

2017-02-01

Peptides

Probable salicylate monooxygenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Probable salicylate monooxygenase

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