SMTL ID : 5hzk.1 (1 other biounit)

Crystal structure of photoinhibitable Intersectin1 containing wildtype LOV2 domain in complex with Cdc42

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 15 residues within 4Å: Chain A: D.13, A.15, V.16, G.17, K.18, T.19, C.20, F.30, A.61, Q.118, D.120, L.121, S.160, A.161, L.162 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:A.15, A:V.16, A:G.17, A:K.18, A:T.19, A:T.19, A:C.20, A:Q.118, A:Q.118, A:S.160, A:A.161, A:L.162 Salt bridges: A:K.18, A:D.120 pi-Stacking: A:F.30, A:F.30

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 21 residues within 4Å: Chain B: V.92, T.94, N.101, N.125, C.126, R.127, L.129, Q.130, V.139, I.142, R.143, I.146, L.156, N.158, N.168, F.170, L.172, F.185, I.186, G.187, Q.189 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:V.92, B:T.94, B:I.146, B:F.170, B:L.172 Hydrogen bonds: B:N.125, B:N.125, B:C.126, B:Q.130, B:N.158, B:N.158, B:N.168, B:Q.189 Salt bridges: B:R.127, B:R.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dagliyan, O. et al., Engineering extrinsic disorder to control protein activity in living cells. Science (2016)

Release Date

2016-12-21

Peptides

Cell division control protein 42 homolog: A
Intersectin-1,NPH1-1,Intersectin-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cell division control protein 42 homolog

Intersectin-1,NPH1-1,Intersectin-1

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