SMTL ID : 5hzq.2 (1 other biounit)

Crystal structure of cellular retinoic acid binding protein 2 (CRABP2)-aryl fluorosulfate covalent conjugate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x YWZ: 4'-[(3,6,9,12-tetraoxapentadec-14-yn-1-yl)oxy][1,1'-biphenyl]-4-yl sulfurofluoridate(Covalent)

YWZ.1: 9 residues within 4Å: Chain A: F.18, A.35, P.42, V.44, T.57, V.79, L.124, R.135, Y.137 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.35, A:P.42, A:T.57, A:V.79 Water bridges: A:T.57 pi-Stacking: A:F.18 pi-Cation interactions: A:R.135

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: Q.77, T.78, V.79, Q.100, W.112, R.114, M.126 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.77, A:Q.100, A:R.114, A:R.114 Water bridges: A:V.79, A:V.79, A:S.111, A:T.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, W. et al., Arylfluorosulfates Inactivate Intracellular Lipid Binding Protein(s) through Chemoselective SuFEx Reaction with a Binding Site Tyr Residue. J.Am.Chem.Soc. (2016)

Release Date

2016-06-01

Peptides

Cellular retinoic acid-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cellular retinoic acid-binding protein 2

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