SMTL ID : 5i25.1

human recombinant coagulation FXI in complex with a peptide derived from human high molecular weight kininogen (HKP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

monomer

Ligands

1 x ASN- PRO- ILE- SER- ASP- PHE- PRO- ASP: ASN-PRO-ILE-SER-ASP-PHE-PRO-ASP(Non-covalent)

ASN-PRO-ILE-SER-ASP-PHE-PRO-ASP.1: 13 residues within 4Å: Chain A: D.101, K.103, N.106, Y.107, N.108, S.109, T.132, A.134, H.143, I.146, L.148, L.163, V.166 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:N.106, A:T.132, A:A.134, A:L.148, A:L.163, A:V.166 Hydrogen bonds: A:N.106, A:N.106 Salt bridges: A:K.103, A:K.150

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.2: 1 residues within 4Å: Chain A: N.72 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.72 NAG.3: 2 residues within 4Å: Chain A: N.108, S.110 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.108, A:S.110 NAG.4: 3 residues within 4Å: Chain A: N.432, S.434, N.512 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.432, A:S.434

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wong, S.S. et al., A novel DFP tripeptide motif interacts with the coagulation factor XI apple 2 domain. Blood (2016)

Release Date

2016-04-06

Peptides

Coagulation factor XI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Coagulation factor XI

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