SMTL ID : 5i29.1

TAF1(2) bound to a pyrrolopyridone compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.21 Å

Oligo State

monomer

Ligands

1 x 67B: N,N-dimethyl-3-(6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl)benzamide(Non-covalent)

67B.1: 12 residues within 4Å: Chain A: W.32, P.33, F.34, P.37, V.38, N.39, F.42, V.43, Y.46, Y.88, N.89, Y.95 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.32, A:F.42, A:V.43 Hydrogen bonds: A:N.39, A:N.89, A:N.89 pi-Stacking: A:Y.95

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: E.138, D.141, M.143 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.138, A:D.141, A:M.143, H2O.5, H2O.6, H2O.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crawford, T.D. et al., Diving into the Water: Inducible Binding Conformations for BRD4, TAF1(2), BRD9, and CECR2 Bromodomains. J.Med.Chem. (2016)

Release Date

2016-06-08

Peptides

Transcription initiation factor TFIID subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor TFIID subunit 1

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