SMTL ID : 5i34.1

Adenylosuccinate synthetase from Cryptococcus neoformans complexed with GDP and IMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

homo-dimer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: D.29, E.30, G.31, K.32, G.33, K.34, G.56, H.57, T.346, K.347, D.349, V.350, G.429, V.430, G.431, P.432 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:D.29, A:E.30, A:E.30, A:G.31, A:K.32, A:G.33, A:K.34, A:G.56, A:K.347, A:K.347, A:G.431, A:P.432 Water bridges: A:T.58 Salt bridges: A:K.32, A:H.57, A:H.57, A:D.349 GDP.3: 18 residues within 4Å: Chain B: D.29, E.30, G.31, K.32, G.33, K.34, A.55, G.56, H.57, R.321, T.346, K.347, D.349, V.350, G.429, V.430, G.431, P.432 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:D.29, B:E.30, B:E.30, B:G.31, B:K.32, B:G.33, B:K.34, B:K.34, B:H.57, B:K.347, B:K.347, B:G.431 Water bridges: B:D.29, B:D.29, B:D.349, B:V.430, B:P.432 Salt bridges: B:K.32, B:D.349

2 x IMP: INOSINIC ACID(Non-covalent)

IMP.2: 20 residues within 4Å: Chain A: W.27, G.28, D.29, N.54, I.147, G.148, T.149, T.150, R.151, I.154, G.155, N.240, L.244, F.253, V.254, T.255, V.289, G.290, R.319 Chain B: R.164 18 PLIP interactions: 16 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:D.29, A:D.29, A:N.54, A:I.147, A:T.150, A:T.150, A:N.240, A:T.255, A:V.289, A:R.319, A:R.319 Water bridges: A:R.151, A:I.154, A:G.155, A:G.155, A:S.256, B:R.164 Salt bridges: B:R.164 IMP.4: 21 residues within 4Å: Chain A: R.164 Chain B: W.27, G.28, D.29, N.54, I.147, G.148, T.149, T.150, R.151, I.154, G.155, N.240, L.244, V.254, T.255, R.288, V.289, G.290, G.291, R.319 18 PLIP interactions: 17 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:D.29, B:I.147, B:G.148, B:T.150, B:T.150, B:N.240, B:T.255, B:R.319, B:R.319 Water bridges: B:K.152, B:I.154, B:G.155, B:G.155, B:T.255, B:S.256, B:R.288, B:G.291 Salt bridges: A:R.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blundell, R.D. et al., Disruption of de Novo Adenosine Triphosphate (ATP) Biosynthesis Abolishes Virulence in Cryptococcus neoformans. Acs Infect Dis. (2016)

Release Date

2016-08-24

Peptides

Adenylosuccinate synthetase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Adenylosuccinate synthetase

Related Entries With Identical Sequence