SMTL ID : 5i3j.1

Structure-Function Studies on Role of Hydrophobic Clamping of a Basic Glutamate in Catalysis by Triosephosphate Isomerase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 2 residues within 4Å: Chain A: R.54 Ligands: NA.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.54 Water bridges: A:R.54 NA.2: 5 residues within 4Å: Chain A: S.22, I.25, D.26, R.54 Ligands: NA.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.22, A:D.26 NA.3: 2 residues within 4Å: Chain A: T.221 Ligands: NA.4 No protein-ligand interaction detected (PLIP) NA.4: 3 residues within 4Å: Chain A: T.221, Q.224 Ligands: NA.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Richard, J.P. et al., Structure-Function Studies of Hydrophobic Residues That Clamp a Basic Glutamate Side Chain during Catalysis by Triosephosphate Isomerase. Biochemistry (2016)

Release Date

2016-05-18

Peptides

Triosephosphate isomerase, glycosomal: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Triosephosphate isomerase, glycosomal

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