SMTL ID : 5i86.1 (1 other biounit)

Crystal structure of the bromodomain of human CREBBP bound to the benzodiazepinone G02778174

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: N.89, S.93, R.94, V.95 Ligands: 69A.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.93, A:R.94, A:V.95 Water bridges: A:S.93

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.2: 5 residues within 4Å: Chain A: L.19, Y.23, L.56, S.57, K.60 No protein-ligand interaction detected (PLIP)

1 x 69A: (4R)-N-benzyl-4-methyl-2-oxo-2,3,4,5-tetrahydro-1H-1,5-benzodiazepine-6-carboxamide(Non-covalent)

69A.3: 11 residues within 4Å: Chain A: P.31, V.36, L.41, I.43, Y.46, Y.88, N.89, R.94, V.95, F.98 Ligands: EDO.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.31, A:L.41, A:I.43, A:I.43, A:Y.46, A:V.95, A:F.98 Hydrogen bonds: A:N.89, A:N.89 pi-Cation interactions: A:R.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, A.M. et al., Fragment-Based Discovery of a Selective and Cell-Active Benzodiazepinone CBP/EP300 Bromodomain Inhibitor (CPI-637). Acs Med.Chem.Lett. (2016)

Release Date

2016-04-20

Peptides

CREB-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CREB-binding protein

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