SMTL ID : 5i94.1

Crystal structure of human glutaminase C in complex with the inhibitor UPGL-00019

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

homo-tetramer

Ligands

2 x 69V: 2-phenyl-N-{5-[4-({5-[(phenylacetyl)amino]-1,3,4-thiadiazol-2-yl}oxy)piperidin-1-yl]-1,3,4-thiadiazol-2-yl}acetamide(Non-covalent)

69V.1: 17 residues within 4Å: Chain A: R.258, K.261, L.262, F.263, L.264, N.265, E.266, D.268, Y.335, K.339 Chain D: K.261, L.262, F.263, L.264, N.265, E.266, Y.335 10 PLIP interactions: 4 interactions with chain D, 6 interactions with chain A Hydrophobic interactions: D:L.262, D:F.263, D:E.266, A:L.262, A:F.263, A:E.266 Hydrogen bonds: D:Y.335, A:F.263, A:L.264, A:K.339 69V.2: 14 residues within 4Å: Chain A: L.257 Chain B: K.261, L.262, F.263, L.264, N.265, E.266, Y.335 Chain C: K.261, L.262, F.263, L.264, N.265, Y.335 10 PLIP interactions: 1 interactions with chain A, 4 interactions with chain C, 5 interactions with chain B Hydrophobic interactions: A:L.257, C:L.262, C:F.263, B:L.262, B:F.263 Hydrogen bonds: C:L.264, C:L.264, B:F.263, B:L.264, B:L.264

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McDermott, L.A. et al., Design and evaluation of novel glutaminase inhibitors. Bioorg.Med.Chem. (2016)

Release Date

2016-05-11

Peptides

Glutaminase kidney isoform, mitochondrial: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Glutaminase kidney isoform, mitochondrial

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