SMTL ID : 5i9j.1

Structure of the cholesterol and lutein-binding domain of human STARD3 at 1.74A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 7 residues within 4Å: Chain A: V.126, V.127, S.128, R.130, G.197, R.198, L.199 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.128, A:S.128, A:S.128 Water bridges: A:L.199, A:L.199 Salt bridges: A:R.130

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.91, R.222, R.229 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.222 Salt bridges: A:R.91, A:R.222, A:R.229

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 11 residues within 4Å: Chain A: K.66, T.67, F.68, L.191, N.192, T.193, D.194, R.201, I.204, H.205, L.208 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.191, A:T.193 EDO.4: 13 residues within 4Å: Chain A: N.134, V.135, R.136, S.148, G.149, I.150, N.168, G.169, P.170, G.171, G.172, I.190, N.192 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.168 Water bridges: A:P.170, A:G.172, A:I.190 EDO.5: 6 residues within 4Å: Chain A: L.87, Q.88, P.89, E.90, R.91, I.104 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.90, A:R.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horvath, M.P. et al., Structure of the lutein-binding domain of human StARD3 at 1.74 angstrom resolution and model of a complex with lutein. Acta Crystallogr.,Sect.F (2016)

Release Date

2016-03-16

Peptides

StAR-related lipid transfer protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

StAR-related lipid transfer protein 3