- Coordinates
- PDB Format
- Method
- ELECTRON CRYSTALLOGRAPHY 3.50 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x GTD: 1-(S-GLUTATHIONYL)-2,4,6-TRINITROCYCLOHEXA-2,5-DIENE(Non-covalent)
- 6 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
PC1.2: 4 residues within 4Å:- Chain A: I.105, V.136, V.140, M.144
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:I.105, A:V.136, A:V.140, A:V.140
PC1.3: 3 residues within 4Å:- Chain A: Y.116, A.120, P.124
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.116, A:Y.116, A:A.120
PC1.7: 4 residues within 4Å:- Chain B: I.105, V.136, V.140, M.144
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:I.105, B:V.136, B:V.140, B:V.140
PC1.8: 3 residues within 4Å:- Chain B: Y.116, A.120, P.124
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:Y.116, B:Y.116, B:A.120
PC1.12: 4 residues within 4Å:- Chain C: I.105, V.136, V.140, M.144
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:I.105, C:V.136, C:V.140, C:V.140
PC1.13: 3 residues within 4Å:- Chain C: Y.116, A.120, P.124
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:Y.116, C:Y.116, C:A.120
- 6 x PLM: PALMITIC ACID(Non-covalent)
PLM.4: 8 residues within 4Å:- Chain A: K.26, L.30, I.115, T.118, I.119, Y.121, L.122, T.123
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:K.26, A:L.30, A:L.30, A:I.115, A:T.118, A:I.119, A:I.119, A:Y.121, A:Y.121, A:L.122
PLM.5: 11 residues within 4Å:- Chain A: P.85, I.89, L.92, Y.93, L.149, L.153
- Chain B: T.17, T.21, L.24, M.27, M.28
12 PLIP interactions:7 interactions with chain A, 5 interactions with chain B- Hydrophobic interactions: A:I.89, A:L.92, A:L.92, A:Y.93, A:Y.93, A:L.149, A:L.153, B:L.24, B:L.24, B:L.24, B:M.27, B:M.28
PLM.9: 8 residues within 4Å:- Chain B: K.26, L.30, I.115, T.118, I.119, Y.121, L.122, T.123
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:K.26, B:L.30, B:L.30, B:I.115, B:T.118, B:I.119, B:I.119, B:Y.121, B:Y.121, B:L.122
PLM.10: 11 residues within 4Å:- Chain B: P.85, I.89, L.92, Y.93, L.149, L.153
- Chain C: T.17, T.21, L.24, M.27, M.28
12 PLIP interactions:5 interactions with chain C, 7 interactions with chain B- Hydrophobic interactions: C:L.24, C:L.24, C:L.24, C:M.27, C:M.28, B:I.89, B:L.92, B:L.92, B:Y.93, B:Y.93, B:L.149, B:L.153
PLM.14: 8 residues within 4Å:- Chain C: K.26, L.30, I.115, T.118, I.119, Y.121, L.122, T.123
10 PLIP interactions:10 interactions with chain C- Hydrophobic interactions: C:K.26, C:L.30, C:L.30, C:I.115, C:T.118, C:I.119, C:I.119, C:Y.121, C:Y.121, C:L.122
PLM.15: 11 residues within 4Å:- Chain A: T.17, T.21, L.24, M.27, M.28
- Chain C: P.85, I.89, L.92, Y.93, L.149, L.153
12 PLIP interactions:7 interactions with chain C, 5 interactions with chain A- Hydrophobic interactions: C:I.89, C:L.92, C:L.92, C:Y.93, C:Y.93, C:L.149, C:L.153, A:L.24, A:L.24, A:L.24, A:M.27, A:M.28
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kuang, Q. et al., Dead-end complex, lipid interactions and catalytic mechanism of microsomal glutathione transferase 1, an electron crystallography and mutagenesis investigation. Sci Rep (2017)
- Release Date
- 2017-07-12
- Peptides
- Microsomal glutathione S-transferase 1: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON CRYSTALLOGRAPHY 3.50 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x GTD: 1-(S-GLUTATHIONYL)-2,4,6-TRINITROCYCLOHEXA-2,5-DIENE(Non-covalent)
- 6 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
- 6 x PLM: PALMITIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kuang, Q. et al., Dead-end complex, lipid interactions and catalytic mechanism of microsomal glutathione transferase 1, an electron crystallography and mutagenesis investigation. Sci Rep (2017)
- Release Date
- 2017-07-12
- Peptides
- Microsomal glutathione S-transferase 1: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A - Membrane
-
We predict this structure to be a membrane protein.