SMTL ID : 5ig0.1

Crystal structure of S. rosetta CaMKII hub

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: V.32, Y.40, E.52, R.102, R.121, F.138, R.140 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.102 Water bridges: A:E.52, A:H.66, A:H.66, A:H.66, A:R.102 Salt bridges: A:R.121, A:R.140 SO4.5: 7 residues within 4Å: Chain B: V.32, Y.40, E.52, R.102, R.121, F.138, R.140 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.102 Water bridges: B:E.52, B:H.66, B:H.66, B:H.66, B:R.102 Salt bridges: B:R.121, B:R.140

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: E.52, P.53, E.54, R.102, V.104, Y.117, R.140 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.140, A:R.140 GOL.3: 4 residues within 4Å: Chain A: D.86 Chain B: V.58, L.59, K.61 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:K.61, A:D.86 Water bridges: B:L.59 GOL.4: 6 residues within 4Å: Chain A: P.17, A.20, K.125, F.131, G.132, W.133 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.125, A:W.133 GOL.6: 7 residues within 4Å: Chain B: E.52, P.53, E.54, R.102, V.104, Y.117, R.140 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.140, B:R.140 GOL.7: 4 residues within 4Å: Chain A: V.58, L.59, K.61 Chain B: D.86 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:K.61, B:D.86 Water bridges: A:L.59 GOL.8: 6 residues within 4Å: Chain B: P.17, A.20, K.125, F.131, G.132, W.133 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.125, B:W.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhattacharyya, M. et al., Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II. Elife (2016)

Release Date

2016-03-23

Peptides

CAMK/CAMK2 protein kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CAMK/CAMK2 protein kinase